Chromosome Segments
Due to computational costs, we simulated longer chromosomes in segments. Segmentation points were chosen to be where there are no notable genomic and epigenomic features nearby. In the following, we list the simulated segments for each chromosome (note that all coordinates are in hg19):
| Chromosome | Segment | Start bp | End bp |
|---|---|---|---|
| chr1 | 1 | 0 | 73500000 |
| chr1 | 2 | 73500000 | 121500000 |
| chr1 | 3 | 142500000 | 189000000 |
| chr1 | 4 | 189000000 | 249250621 |
| chr2 | 1 | 0 | 52500000 |
| chr2 | 2 | 52500000 | 92400000 |
| chr2 | 3 | 95300000 | 147500000 |
| chr2 | 4 | 147500000 | 194500000 |
| chr2 | 5 | 194500000 | 243199373 |
| chr3 | 1 | 0 | 90600000 |
| chr3 | 2 | 93400000 | 163500000 |
| chr3 | 3 | 163500000 | 198022430 |
| chr4 | 1 | 0 | 50000000 |
| chr4 | 2 | 52500000 | 136500000 |
| chr4 | 3 | 136500000 | 191154276 |
| chr5 | 1 | 0 | 46500000 |
| chr5 | 2 | 49400000 | 105000000 |
| chr5 | 3 | 105000000 | 180915260 |
| chr6 | 1 | 0 | 58800000 |
| chr6 | 2 | 61800000 | 103500000 |
| chr6 | 3 | 103500000 | 171115067 |
| chr7 | 1 | 0 | 58100000 |
| chr7 | 2 | 61000000 | 119000000 |
| chr7 | 3 | 119000000 | 159138663 |
| chr8 | 1 | 0 | 43900000 |
| chr8 | 2 | 46800000 | 84000000 |
| chr8 | 3 | 84000000 | 146364022 |
| chr9 | 1 | 0 | 47400000 |
| chr9 | 2 | 65400000 | 141213431 |
| chr10 | 1 | 0 | 39200000 |
| chr10 | 2 | 42300000 | 85000000 |
| chr10 | 3 | 85000000 | 135534747 |
| chr11 | 1 | 0 | 51600000 |
| chr11 | 2 | 54600000 | 135006516 |
| chr12 | 1 | 0 | 34900000 |
| chr12 | 2 | 37800000 | 84500000 |
| chr12 | 3 | 84500000 | 133851895 |
| chr13 | 1 | 19000000 | 56000000 |
| chr13 | 2 | 56000000 | 115169878 |
| chr14 | 1 | 19000000 | 107349540 |
| chr15 | 1 | 20000000 | 102531392 |
| chr16 | 1 | 0 | 35300000 |
| chr16 | 2 | 46300000 | 90354753 |
| chr17 | 1 | 0 | 81195210 |
| chr18 | 1 | 0 | 78077248 |
| chr19 | 1 | 0 | 59128983 |
| chr20 | 1 | 0 | 63025520 |
| chr21 | 1 | 14300000 | 48129895 |
| chr22 | 1 | 16000000 | 51304566 |
| chrX | 1 | 0 | 58600000 |
| chrX | 2 | 61600000 | 121000000 |
| chrX | 3 | 121000000 | 155270560 |